Uses of Class
org.broad.igv.bbfile.RPTreeLeafNodeItem

Packages that use RPTreeLeafNodeItem

org.broad.igv.bbfile

Uses of RPTreeLeafNodeItem in org.broad.igv.bbfile

Methods in org.broad.igv.bbfile that return types with arguments of type RPTreeLeafNodeItem

java.util.ArrayList<RPTreeLeafNodeItem>	RPTree.getChromosomeDataHits(RPChromosomeRegion selectionRegion, boolean contained)
java.util.ArrayList<RPTreeLeafNodeItem>	BigBedIterator.getLeafItems()

Constructors in org.broad.igv.bbfile with parameters of type RPTreeLeafNodeItem

BigBedDataBlock(net.sf.samtools.util.SeekableStream fis, RPTreeLeafNodeItem leafHitItem, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, int uncompressBufSize)

BigWigDataBlock(net.sf.samtools.util.SeekableStream fis, RPTreeLeafNodeItem leafHitItem, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, int uncompressBufSize)

BigWigSection(byte[] sectionBuffer, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, RPTreeLeafNodeItem leafHitItem)

ZoomDataBlock(int zoomLevel, net.sf.samtools.util.SeekableStream fis, RPTreeLeafNodeItem leafHitItem, java.util.HashMap<java.lang.Integer,java.lang.String> chromosomeMap, boolean isLowToHigh, int uncompressBufSize)