JAnnot 1.3 is available

JAnnot has now support for a few new data types:

  • Wiggle tracks (continuous valued data), with some parsers and an internal representation
  • Multiple alignment data, with some parsers and internal representation
  • Added support for syntenic block representation


API docs

Besides new types of data also some other improvements were made to JAnnot.

  • The concept of an Annotation was made more general, to make it easier to add data types in the future
  • Made some speed improvements for faster loading times of large data sets
  • Improved documentation of some classes
  • Removed progress monitoring, this is something for the front-end
  • Fixed an issue to get qualifiers from a feature