org.broad.igv.data
Interface DataSource

public interface DataSource

Author:

jrobinso

Method Summary

java.util.Collection<WindowFunction>	getAvailableWindowFunctions()
double	getDataMax()
double	getDataMin()
java.util.List<LocusScore>	getSummaryScoresForRange(java.lang.String chr, int startLocation, int endLocation, int zoom)
WindowFunction	getWindowFunction()
boolean	isLogNormalized()
void	refreshData(long timestamp)
void	setWindowFunction(WindowFunction statType)

Method Detail

getDataMax

double getDataMax()

getDataMin

double getDataMin()

getSummaryScoresForRange

java.util.List<LocusScore> getSummaryScoresForRange(java.lang.String chr,
                                                    int startLocation,
                                                    int endLocation,
                                                    int zoom)

setWindowFunction

void setWindowFunction(WindowFunction statType)

isLogNormalized

boolean isLogNormalized()

refreshData

void refreshData(long timestamp)

getWindowFunction

WindowFunction getWindowFunction()

getAvailableWindowFunctions

java.util.Collection<WindowFunction> getAvailableWindowFunctions()