org.broad.igv.bbfile
Interface BPTreeNode

All Known Implementing Classes:

BPTreeChildNode, BPTreeLeafNode

public interface BPTreeNode

File retrieved from BigWig project at Google code on July 26, 2011, revision 36 http://code.google.com/p/bigwig/ This project provides java readers for the UCSC's BigWig and BigBed formats. It was originally developed by Martin Decautis and Jim Robinson for the Integrative Genomics Viewer (http://www.broadinstitute.org/igv). Thanks to Jim Kent and Ann Zweig and from UCSC for their assistance. Modification to work with GenomeView by Thomas Abeel.

Author:

Martin Decautis, Jim Robinson, Thomas Abeel

Method Summary

boolean	deleteItem(int index)
int	getHighestChromID()
java.lang.String	getHighestChromKey()
org.broad.igv.bbfile.BPTreeNodeItem	getItem(int index)
int	getItemCount()
int	getLowestChromID()
java.lang.String	getLowestChromKey()
long	getNodeIndex()
boolean	insertItem(org.broad.igv.bbfile.BPTreeNodeItem item)
boolean	isLeaf()
void	printItems()

Method Detail

getNodeIndex

long getNodeIndex()

isLeaf

boolean isLeaf()

insertItem

boolean insertItem(org.broad.igv.bbfile.BPTreeNodeItem item)

deleteItem

boolean deleteItem(int index)

getItemCount

int getItemCount()

getItem

org.broad.igv.bbfile.BPTreeNodeItem getItem(int index)

getLowestChromKey

java.lang.String getLowestChromKey()

getHighestChromKey

java.lang.String getHighestChromKey()

getLowestChromID

int getLowestChromID()

getHighestChromID

int getHighestChromID()

printItems

void printItems()