org.broad.igv.bbfile
Class BPTreeLeafNodeItem

java.lang.Object
  org.broad.igv.bbfile.BPTreeLeafNodeItem

public class BPTreeLeafNodeItem
extends java.lang.Object

File retrieved from BigWig project at Google code on July 26, 2011, revision 36 http://code.google.com/p/bigwig/ This project provides java readers for the UCSC's BigWig and BigBed formats. It was originally developed by Martin Decautis and Jim Robinson for the Integrative Genomics Viewer (http://www.broadinstitute.org/igv). Thanks to Jim Kent and Ann Zweig and from UCSC for their assistance. Modification to work with GenomeView by Thomas Abeel.

Author:

Martin Decautis, Jim Robinson, Thomas Abeel

Constructor Summary

BPTreeLeafNodeItem(long leafIndex, java.lang.String chromKey, int chromID, int chromSize)

Method Summary

boolean	chromKeysMatch(java.lang.String chromKey)
int	getChromID()
java.lang.String	getChromKey()
int	getChromSize()
long	getItemIndex()
boolean	isLeafItem()
void	print()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BPTreeLeafNodeItem

public BPTreeLeafNodeItem(long leafIndex,
                          java.lang.String chromKey,
                          int chromID,
                          int chromSize)

Method Detail

getItemIndex

public long getItemIndex()

isLeafItem

public boolean isLeafItem()

getChromKey

public java.lang.String getChromKey()

chromKeysMatch

public boolean chromKeysMatch(java.lang.String chromKey)

print

public void print()

getChromID

public int getChromID()

getChromSize

public int getChromSize()