org.broad.igv.bbfile
Class BBZoomLevelHeader

java.lang.Object
  org.broad.igv.bbfile.BBZoomLevelHeader

public class BBZoomLevelHeader
extends java.lang.Object

File retrieved from BigWig project at Google code on July 26, 2011, revision 36 http://code.google.com/p/bigwig/ This project provides java readers for the UCSC's BigWig and BigBed formats. It was originally developed by Martin Decautis and Jim Robinson for the Integrative Genomics Viewer (http://www.broadinstitute.org/igv). Thanks to Jim Kent and Ann Zweig and from UCSC for their assistance. Modification to work with GenomeView by Thomas Abeel.

Author:

Martin Decautis, Jim Robinson, Thomas Abeel

Field Summary

static int

ZOOM_LEVEL_HEADER_SIZE

Constructor Summary

BBZoomLevelHeader(int zoomLevel, int reductionLevel, int reserved, long dataOffset, long indexOffset)

BBZoomLevelHeader(net.sf.samtools.util.SeekableStream fis, long fileOffset, int zoomLevel, boolean isLowToHigh)

Method Summary

long	getDataOffset()
long	getIndexOffset()
int	getReductionLevel()
int	getReserved()
int	getZoomLevel()
void	print()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ZOOM_LEVEL_HEADER_SIZE

public static final int ZOOM_LEVEL_HEADER_SIZE

See Also:

Constant Field Values

Constructor Detail

BBZoomLevelHeader

public BBZoomLevelHeader(net.sf.samtools.util.SeekableStream fis,
                         long fileOffset,
                         int zoomLevel,
                         boolean isLowToHigh)

BBZoomLevelHeader

public BBZoomLevelHeader(int zoomLevel,
                         int reductionLevel,
                         int reserved,
                         long dataOffset,
                         long indexOffset)

Method Detail

getZoomLevel

public int getZoomLevel()

getReductionLevel

public int getReductionLevel()

getReserved

public int getReserved()

getDataOffset

public long getDataOffset()

getIndexOffset

public long getIndexOffset()

print

public void print()