org.broad.igv.bbfile
Class BBCompressionUtils

java.lang.Object
  org.broad.igv.bbfile.BBCompressionUtils

public class BBCompressionUtils
extends java.lang.Object

File retrieved from BigWig project at Google code on July 26, 2011, revision 36 http://code.google.com/p/bigwig/ This project provides java readers for the UCSC's BigWig and BigBed formats. It was originally developed by Martin Decautis and Jim Robinson for the Integrative Genomics Viewer (http://www.broadinstitute.org/igv). Thanks to Jim Kent and Ann Zweig and from UCSC for their assistance. Modification to work with GenomeView by Thomas Abeel.

Author:

Martin Decautis, Jim Robinson, Thomas Abeel

Constructor Summary

BBCompressionUtils()

Method Summary

static byte[]	compress(byte[] data, int compressBufSize)
static byte[]	decompress(byte[] data, int uncompressBufSize)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BBCompressionUtils

public BBCompressionUtils()

Method Detail

decompress

public static byte[] decompress(byte[] data,
                                int uncompressBufSize)

compress

public static byte[] compress(byte[] data,
                              int compressBufSize)