Difference between revisions of "Bam2tdf"
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Requirements: | Requirements: | ||
| − | - Java 7+ | + | - Java 7+ |
| − | - BAM file needs to be sorted and indexed | + | - BAM file needs to be sorted and indexed |
Revision as of 20:32, 15 November 2013
BAM2TDF is a command-line tool that converts BAM files to TDF (coverage) files.
You can download the latest version from the GenomeView nightly builds:
http://genomeview.org/jenkins/bam2tdf-nightly/
Instructions:
~$ java -jar bam2tdf.jar <location of your bam file>
Requirements:
- Java 7+ - BAM file needs to be sorted and indexed