Difference between revisions of "Bam2tdf"
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(Created page with "BAM2TDF is a command-line tool that converts BAM files to TDF (coverage) files. You can download the latest version from the GenomeView nightly builds: http://genomeview.org/...") |
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You can download the latest version from the GenomeView nightly builds: | You can download the latest version from the GenomeView nightly builds: | ||
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http://genomeview.org/jenkins/bam2tdf-nightly/ | http://genomeview.org/jenkins/bam2tdf-nightly/ | ||
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| + | Instructions: | ||
~$ java -jar bam2tdf.jar <location of your bam file> | ~$ java -jar bam2tdf.jar <location of your bam file> | ||
Revision as of 19:55, 21 October 2013
BAM2TDF is a command-line tool that converts BAM files to TDF (coverage) files.
You can download the latest version from the GenomeView nightly builds:
http://genomeview.org/jenkins/bam2tdf-nightly/
Instructions:
~$ java -jar bam2tdf.jar <location of your bam file>
Requirements: - Java 7+ - BAM file needs to be sorted and indexed