![[ICO]](/icons/blank.gif) | Name | Last modified | Size | Description |
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![[PARENTDIR]](/icons/back.gif) | Parent Directory | | - | |
![[ ]](/icons/unknown.gif) | AddOrReplaceReadGroups.jar | 2013-10-18 16:52 | 892K | |
![[ ]](/icons/unknown.gif) | BamIndexStats.jar | 2013-10-18 16:52 | 891K | |
![[ ]](/icons/unknown.gif) | BamToBfq.jar | 2013-10-18 16:52 | 905K | |
![[ ]](/icons/unknown.gif) | BuildBamIndex.jar | 2013-10-18 16:52 | 890K | |
![[ ]](/icons/unknown.gif) | CalculateHsMetrics.jar | 2013-10-18 16:52 | 960K | |
![[ ]](/icons/unknown.gif) | CheckIlluminaDirectory.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | CleanSam.jar | 2013-10-18 16:52 | 896K | |
![[ ]](/icons/unknown.gif) | CollectAlignmentSummaryMetrics.jar | 2013-10-18 16:52 | 939K | |
![[ ]](/icons/unknown.gif) | CollectGcBiasMetrics.jar | 2013-10-18 16:52 | 924K | |
![[ ]](/icons/unknown.gif) | CollectInsertSizeMetrics.jar | 2013-10-18 16:52 | 941K | |
![[ ]](/icons/unknown.gif) | CollectMultipleMetrics.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | CollectRnaSeqMetrics.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | CollectTargetedPcrMetrics.jar | 2013-10-18 16:52 | 964K | |
![[ ]](/icons/unknown.gif) | CompareSAMs.jar | 2013-10-18 16:52 | 857K | |
![[ ]](/icons/unknown.gif) | CreateSequenceDictionary.jar | 2013-10-18 16:52 | 907K | |
![[ ]](/icons/unknown.gif) | DownsampleSam.jar | 2013-10-18 16:52 | 892K | |
![[ ]](/icons/unknown.gif) | EstimateLibraryComplexity.jar | 2013-10-18 16:52 | 908K | |
![[ ]](/icons/unknown.gif) | ExtractIlluminaBarcodes.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | ExtractSequences.jar | 2013-10-18 16:52 | 914K | |
![[ ]](/icons/unknown.gif) | FastqToSam.jar | 2013-10-18 16:52 | 912K | |
![[ ]](/icons/unknown.gif) | FilterSamReads.jar | 2013-10-18 16:52 | 904K | |
![[ ]](/icons/unknown.gif) | FixMateInformation.jar | 2013-10-18 16:52 | 918K | |
![[ ]](/icons/unknown.gif) | IlluminaBasecallsToFastq.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | IlluminaBasecallsToSam.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | IntervalListTools.jar | 2013-10-18 16:52 | 900K | |
![[ ]](/icons/unknown.gif) | MakeSitesOnlyVcf.jar | 2013-10-18 16:52 | 1.5M | |
![[ ]](/icons/unknown.gif) | MarkDuplicates.jar | 2013-10-18 16:52 | 953K | |
![[ ]](/icons/unknown.gif) | MarkIlluminaAdapters.jar | 2013-10-18 16:52 | 903K | |
![[ ]](/icons/unknown.gif) | MeanQualityByCycle.jar | 2013-10-18 16:52 | 923K | |
![[ ]](/icons/unknown.gif) | MergeBamAlignment.jar | 2013-10-18 16:52 | 1.0M | |
![[ ]](/icons/unknown.gif) | MergeSamFiles.jar | 2013-10-18 16:52 | 912K | |
![[ ]](/icons/unknown.gif) | MergeVcfs.jar | 2013-10-18 16:52 | 1.5M | |
![[ ]](/icons/unknown.gif) | NormalizeFasta.jar | 2013-10-18 16:52 | 906K | |
![[ ]](/icons/unknown.gif) | QualityScoreDistribution.jar | 2013-10-18 16:52 | 921K | |
![[ ]](/icons/unknown.gif) | ReorderSam.jar | 2013-10-18 16:52 | 908K | |
![[ ]](/icons/unknown.gif) | ReplaceSamHeader.jar | 2013-10-18 16:52 | 891K | |
![[ ]](/icons/unknown.gif) | RevertSam.jar | 2013-10-18 16:52 | 894K | |
![[ ]](/icons/unknown.gif) | SamFormatConverter.jar | 2013-10-18 16:52 | 891K | |
![[ ]](/icons/unknown.gif) | SamToFastq.jar | 2013-10-18 16:52 | 900K | |
![[ ]](/icons/unknown.gif) | SortSam.jar | 2013-10-18 16:52 | 891K | |
![[ ]](/icons/unknown.gif) | SplitVcfs.jar | 2013-10-18 16:52 | 1.5M | |
![[ ]](/icons/unknown.gif) | ValidateSamFile.jar | 2013-10-18 16:52 | 958K | |
![[ ]](/icons/unknown.gif) | VcfFormatConverter.jar | 2013-10-18 16:52 | 1.5M | |
![[ ]](/icons/unknown.gif) | ViewSam.jar | 2013-10-18 16:52 | 891K | |
![[ ]](/icons/unknown.gif) | apache-ant-1.8.2-bzip2.jar | 2013-10-18 16:52 | 30K | |
![[ ]](/icons/unknown.gif) | commons-jexl-2.1.1.jar | 2013-10-18 16:52 | 261K | |
![[ ]](/icons/unknown.gif) | commons-logging-1.1.1.jar | 2013-10-18 16:52 | 59K | |
![[ ]](/icons/unknown.gif) | picard-1.100.jar | 2013-10-18 16:52 | 1.6M | |
![[ ]](/icons/unknown.gif) | sam-1.100.jar | 2013-10-18 16:52 | 623K | |
![[ ]](/icons/unknown.gif) | snappy-java-1.0.3-rc3.jar | 2013-10-18 16:52 | 967K | |
![[ ]](/icons/unknown.gif) | tribble-1.100.jar | 2013-10-18 16:52 | 293K | |
![[ ]](/icons/unknown.gif) | variant-1.100.jar | 2013-10-18 16:52 | 556K | |
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